- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Class | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | tca-mir-9a | mir-9 | tca-miR-9a | 23/23 | CH476263.1 | + | 10-32 | N/A | - | miRBase_13_0 | 41/59 | 5/206 |
2 | tca-mir-929 | mir-929 | tca-miR-929 | 21/21 | CH476296.1 | - | 26-46 | N/A | - | miRBase_13_0 | 5/17 | 2/21 |
3 | tca-mir-315 | mir-315 | tca-miR-315 | 22/22 | CH476320.1 | + | 12-33 | N/A | - | miRBase_13_0 | 18/21 | 1/35 |
4 | tca-mir-9b | mir-9 | tca-miR-9b | 23/23 | CH476343.1 | + | 34-56 | N/A | - | miRBase_13_0 | 41/59 | 5/206 |
5 | tca-mir-1000 | mir-1000 | tca-miR-1000 | 21/21 | CM000276.1 | + | 15-35 | N/A | - | miRBase_13_0 | 4/6 | 2/9 |
6 | tca-mir-10 | mir-10 | tca-miR-10 | 21/21 | CM000277.1 | + | 11-31 | N/A | - | miRBase_13_0 | 43/59 | 2/124 |
7 | tca-mir-970 | mir-970 | tca-miR-970 | 21/21 | CM000277.1 | + | 57-77 | N/A | - | miRBase_13_0 | 4/4 | 2/5 |
8 | tca-mir-iab-4 | mir-iab-4 | tca-miR-iab-4-5p | 22/22 | CM000277.1 | - | 14-35 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
9 | tca-mir-iab-4 | mir-iab-4 | tca-miR-iab-4-3p | 24/24 | CM000277.1 | - | 48-71 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
10 | tca-mir-993 | mir-993 | tca-miR-993 | 23/23 | CM000277.1 | - | 55-77 | N/A | - | miRBase_13_0 | 5/5 | 1/6 |
11 | tca-mir-71 | mir-71 | tca-miR-71 | 22/22 | CM000278.1 | + | 10-31 | N/A | - | miRBase_13_0 | 13/17 | 2/25 |
12 | tca-mir-263b | mir-263 | tca-miR-263b | 20/20 | CM000278.1 | + | 11-30 | N/A | - | miRBase_13_0 | 16/26 | 3/53 |
13 | tca-mir-219 | mir-219 | tca-miR-219 | 23/23 | CM000278.1 | + | 11-33 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
14 | tca-mir-13b | mir-13 | tca-miR-13b | 22/22 | CM000278.1 | + | 46-67 | N/A | - | miRBase_13_0 | 17/18 | 3/75 |
15 | tca-mir-13a | mir-13 | tca-miR-13a | 22/22 | CM000278.1 | + | 48-69 | N/A | - | miRBase_13_0 | 17/18 | 3/75 |
16 | tca-mir-2-3 | mir-2 | tca-miR-2 | 23/23 | CM000278.1 | + | 49-71 | N/A | - | miRBase_13_0 | 20/21 | 6/116 |
17 | tca-mir-2-2 | mir-2 | tca-miR-2 | 23/23 | CM000278.1 | + | 50-72 | N/A | - | miRBase_13_0 | 20/21 | 6/116 |
18 | tca-mir-2-1 | mir-2 | tca-miR-2 | 23/23 | CM000278.1 | + | 52-74 | N/A | - | miRBase_13_0 | 20/21 | 6/116 |
19 | tca-mir-14 | mir-14 | tca-miR-14 | 21/21 | CM000278.1 | + | 53-73 | N/A | - | miRBase_13_0 | 16/16 | 2/29 |
20 | tca-mir-283 | mir-283 | tca-miR-283 | 20/20 | CM000278.1 | - | 11-30 | N/A | - | miRBase_13_0 | 16/17 | 2/23 |
21 | tca-mir-276 | mir-276 | tca-miR-276* | 20/20 | CM000278.1 | - | 11-30 | N/A | - | miRBase_13_0 | 17/17 | 2/53 |
22 | tca-mir-12 | mir-12 | tca-miR-12 | 23/23 | CM000278.1 | - | 16-38 | N/A | - | miRBase_13_0 | 18/18 | 2/28 |
23 | tca-mir-276 | mir-276 | tca-miR-276 | 22/22 | CM000278.1 | - | 46-67 | N/A | - | miRBase_13_0 | 17/17 | 2/53 |
24 | tca-bantam | bantam | tca-bantam | 23/23 | CM000278.1 | - | 52-74 | N/A | - | miRBase_13_0 | 20/22 | 2/30 |
25 | tca-mir-981 | mir-981 | tca-miR-981 | 22/22 | CM000279.1 | + | 61-82 | N/A | - | miRBase_13_0 | 6/13 | 2/16 |
26 | tca-mir-33 | mir-33 | tca-miR-33 | 19/19 | CM000279.1 | - | 25-43 | N/A | - | miRBase_13_0 | 34/54 | 2/96 |
27 | tca-mir-210 | mir-210 | tca-miR-210 | 21/21 | CM000279.1 | - | 49-69 | N/A | - | miRBase_13_0 | 33/43 | 2/62 |
28 | tca-mir-965 | mir-965 | tca-miR-965 | 22/22 | CM000280.1 | + | 63-84 | N/A | - | miRBase_13_0 | 4/6 | 2/10 |
29 | tca-mir-31a | mir-31 | tca-miR-31a | 22/22 | CM000280.1 | - | 12-33 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
30 | tca-mir-304 | mir-304 | tca-miR-304 | 23/23 | CM000280.1 | - | 13-35 | N/A | - | miRBase_13_0 | 12/13 | 1/18 |
31 | tca-mir-932 | mir-932 | tca-miR-932 | 22/22 | CM000280.1 | - | 14-35 | N/A | - | miRBase_13_0 | 4/13 | 2/14 |
32 | tca-mir-263a | mir-263 | tca-miR-263a | 24/24 | CM000280.1 | - | 15-38 | N/A | - | miRBase_13_0 | 16/26 | 3/53 |
33 | tca-mir-1 | mir-1 | tca-miR-1 | 22/22 | CM000280.1 | - | 47-68 | N/A | - | miRBase_13_0 | 41/61 | 2/166 |
34 | tca-mir-124 | mir-124 | tca-miR-124 | 23/23 | CM000280.1 | - | 48-70 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
35 | tca-mir-133 | mir-133 | tca-miR-133 | 22/22 | CM000280.1 | - | 51-72 | N/A | - | miRBase_13_0 | 47/64 | 2/138 |
36 | tca-mir-279b | mir-279 | tca-miR-279b | 22/22 | CM000280.1 | - | 59-80 | N/A | - | miRBase_13_0 | 18/18 | 2/23 |
37 | tca-let-7 | let-7 | tca-let-7 | 21/21 | CM000281.1 | + | 8-28 | N/A | - | miRBase_13_0 | 44/65 | 2/337 |
38 | tca-mir-100 | mir-100 | tca-miR-100 | 22/22 | CM000281.1 | + | 10-31 | N/A | - | miRBase_13_0 | 39/56 | 2/88 |
39 | tca-mir-125 | mir-125 | tca-miR-125 | 22/22 | CM000281.1 | + | 11-32 | N/A | - | miRBase_13_0 | 45/62 | 2/195 |
40 | tca-mir-87 | mir-87 | tca-miR-87 | 21/21 | CM000281.1 | + | 52-72 | N/A | - | miRBase_13_0 | 21/27 | 3/39 |
41 | tca-mir-282 | mir-282 | tca-miR-282 | 24/24 | CM000282.1 | + | 9-32 | N/A | - | miRBase_13_0 | 16/16 | 2/28 |
42 | tca-mir-7 | mir-7 | tca-miR-7 | 23/23 | CM000282.1 | + | 11-33 | N/A | - | miRBase_13_0 | 46/63 | 2/143 |
43 | tca-mir-137 | mir-137 | tca-miR-137 | 22/22 | CM000282.1 | + | 48-69 | N/A | - | miRBase_13_0 | 24/47 | 2/69 |
44 | tca-mir-281 | mir-281 | tca-miR-281* | 22/22 | CM000282.1 | - | 10-31 | N/A | - | miRBase_13_0 | 25/33 | 2/68 |
45 | tca-mir-34 | mir-34 | tca-miR-34 | 22/22 | CM000282.1 | - | 11-32 | N/A | - | miRBase_13_0 | 45/67 | 2/144 |
46 | tca-mir-190 | mir-190 | tca-miR-190 | 25/25 | CM000282.1 | - | 14-38 | N/A | - | miRBase_13_0 | 24/55 | 2/95 |
47 | tca-mir-279a | mir-279 | tca-miR-279a | 22/22 | CM000282.1 | - | 43-64 | N/A | - | miRBase_13_0 | 18/18 | 2/23 |
48 | tca-mir-281 | mir-281 | tca-miR-281 | 21/21 | CM000282.1 | - | 45-65 | N/A | - | miRBase_13_0 | 25/33 | 2/68 |
49 | tca-mir-317 | mir-317 | tca-miR-317 | 25/25 | CM000282.1 | - | 46-70 | N/A | - | miRBase_13_0 | 18/19 | 2/32 |
50 | tca-mir-184 | mir-184 | tca-miR-184 | 22/22 | CM000282.1 | - | 49-70 | N/A | - | miRBase_13_0 | 40/54 | 2/73 |
51 | tca-mir-277 | mir-277 | tca-miR-277 | 23/23 | CM000282.1 | - | 53-75 | N/A | - | miRBase_13_0 | 17/17 | 2/32 |
52 | tca-mir-307 | mir-307 | tca-miR-307 | 20/20 | CM000283.1 | + | 42-61 | N/A | - | miRBase_13_0 | 16/17 | 2/26 |
53 | tca-mir-92a | mir-92 | tca-miR-92a | 20/20 | CM000283.1 | + | 49-68 | N/A | - | miRBase_13_0 | 47/65 | 4/170 |
54 | tca-mir-92b | mir-92 | tca-miR-92b | 20/20 | CM000283.1 | + | 53-72 | N/A | - | miRBase_13_0 | 47/65 | 4/170 |
55 | tca-mir-927 | mir-927 | tca-miR-927 | 22/22 | CM000284.1 | + | 7-28 | N/A | - | miRBase_13_0 | 5/14 | 2/16 |
56 | tca-mir-305 | mir-305 | tca-miR-305 | 23/23 | CM000284.1 | - | 10-32 | N/A | - | miRBase_13_0 | 16/19 | 2/23 |
57 | tca-mir-275 | mir-275 | tca-miR-275 | 23/23 | CM000284.1 | - | 45-67 | N/A | - | miRBase_13_0 | 16/16 | 2/25 |
58 | tca-mir-8 | mir-8 | tca-miR-8 | 23/23 | CM000284.1 | - | 47-69 | N/A | - | miRBase_13_0 | 20/23 | 2/35 |
Total | 58 record(s). |